1

Reachability computation for hybrid systems with Ariadne

Systems Biology: Models and Logics

The field of systems biology focuses on creating a finely detailed picture of biological mechanisms. Recently, the need has arisen for more and more sophisticated and mathematically well founded computational tools, capable of analyzing those models …

The importance of being (a little bit) discrete

An Experimental Comparison of Constraint Logic Programming and Answer Set Programming.

Enhancing the Computation of Approximate Solutions of the Protein Structure Determination

This paper investigates alternative global constraints that can be introduced in a constraint solver over discrete crystal lattices. The objective is to enhance the efficiency of lattice solvers in dealing with the construction of approximate …

Module Identification Using Biological Constraints

Multivalued Action Languages with Constraints in CLP(FD)

Action description languages, such as A and B [6], are expressive instruments introduced for formalizing planning domains and problems. The paper starts by proposing a methodology to encode an action language (with conditional effects and static …

Reactive Systems over Directed Bigraphs

Synchronized Product of Semi-Algebraic O-Minimal Hybrid Automata

This paper addresses questions regarding the decidability of hybrid automata that may be constructed hierarchically and in a modular way, as is the case in many exemplar systems, be it natural or engineered. Since an important step in such …

The Density Constraint

The paper expands on the growing body of literature which makes use of constraint programming techniques to solve bioinformatics problems, es- pecially in the context of discrete models. The focus is on the use of constraint programming methodologies …