CompBio & Bioinf @ UniUd
CompBio & Bioinf @ UniUd
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Nicola Prezza
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Wheeler Languages
From LZ77 to the run-length encoded burrows-wheeler transform, and back
LZ77 Computation Based on the Run-Length Encoded BWT
Computing LZ77 in Run-Compressed Space
Fast, accurate, and lightweight analysis of BS-treated reads with ERNE 2
Average Linear Time and Compressed Space Construction of the Burrows-Wheeler Transform
Fast online Lempel-Ziv factorization in compressed space
Fast randomized approximate string matching with succinct hash data structures
Hashing and Indexing: Succinct DataStructures and Smoothed Analysis
ERNE-BS5: Aligning BS-treated sequences by multiple hits on a 5-letters alphabet
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